We propose a new approach for modelling the process of RNA folding as a graph transformation guided by the global value of free energy. Since the folding process evolves towards a configuration in which the free energy is minimal, the global behaviour resembles the one of a self-adaptive system. Each RNA configuration is a graph and the evolution of configurations is constrained by precise rules that can be described by a graph grammar.

A Graph Grammar for Modelling RNA Folding

MAMUYE, ADANE LETTA;MERELLI, Emanuela;TESEI, Luca
2016-01-01

Abstract

We propose a new approach for modelling the process of RNA folding as a graph transformation guided by the global value of free energy. Since the folding process evolves towards a configuration in which the free energy is minimal, the global behaviour resembles the one of a self-adaptive system. Each RNA configuration is a graph and the evolution of configurations is constrained by precise rules that can be described by a graph grammar.
2016
262
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11581/398513
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